- G. Hoaraua,
- P. K. Mukherjeeb,
- C. Gower-Rousseauc,
- C. Hagerb,
- J. Chandrab,
- M. A. Retuertob,
- C. Neuta,
- S. Vermeired,
- J. Clementee,f,
- J. F. Colombelc,g,
- H. Fujiokah,
- D. Poulaina,
- B. Sendida,
- M. A. Ghannoumb
+Author Affiliations
- Address correspondence to B. Sendid, bsendid@univ-lille2.fr, or M. A. Ghannoum,Mahmoud.Ghannoum@case.edu.
- G.H. and P.K.M. contributed equally to the study.
- Editor Robert A. Bonomo, Louis Stokes Veterans Affairs Medical Center
ABSTRACT
Crohn’s disease (CD) results from a complex interplay between host genetic factors and endogenous microbial communities. In the current study, we used Ion Torrent sequencing to characterize the gut bacterial microbiota (bacteriome) and fungal community (mycobiome) in patients with CD and their nondiseased first-degree relatives (NCDR) in 9 familial clusters living in northern France-Belgium and in healthy individuals from 4 families living in the same area (non-CD unrelated [NCDU]).